PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0011s0057.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 802aa    MW: 87630 Da    PI: 6.8672
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0011s0057.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.72.2e-11553629271
             trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 
                          W   ev +L++a+++ +er++ ++        + +W++v k+++e ++  r  + Ck+kwe +  +yk ik++++k 
  Mapoly0011s0057.2.p 553 WDTWEVILLVQAKKYEWERSECSSgkdrveTSGERWKKVEKFLKENKVvDRDGIACKNKWEAILSDYKSIKDWNRKP 629
                          9999***************9954323334499***********988877*************************984 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-8551632No hitNo description
PROSITE profilePS500906.504565616IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 802 aa     Download sequence    Send to blast
MKPGENVWDA IAADLAAVTA ATNGSDEIAD EDIRVEVQKV KIAELSHTSD SLELESGVNK  60
SHDCTGKIET NDLHADGISD SGLDCSSKPL LEGAHSGVKV GDELNVDSLL CQEEASEAKD  120
DYAQNVVETL TCSTEEDANN HSRHVADEEK KGKEDKGGNI LGKRNRKLNH RATRSSGKKL  180
KLQAPVNSDA GDISHRDKQD VTISSEGSLS KAQNLQKKPE WNEADGANIH SLPELEKLQR  240
VFTSLNTACG YLLKQQKIAS WENVKQAMKQ LSGADSETIS VDDVRRLSQL CPQIVVLSQF  300
SGEGEDISFQ IELFDPADGV KLNPPNSSNG STAVDAHDGG TSKSISAGKK IGDSEARVIV  360
ESRQKAFQMS LAQVAHQFQA PQSTSVSVGG DEHLKHPKLP HPAMLRHPTH EGRHSMVPAL  420
IGPPAQQLVL PRPPLLPQQL QHSYVNMSDA YPGLPFPLPF QPTNGYGPFG SFPQPQCNNY  480
AGYQLSNHPS SIPSSSQLSS MPMQSNVPHR SPSTTIIPLP IYADTPEAPS APEPSPYHGL  540
SLNKAKRRRS RNWDTWEVIL LVQAKKYEWE RSECSSGKDR VETSGERWKK VEKFLKENKV  600
VDRDGIACKN KWEAILSDYK SIKDWNRKPG NTVYSLLSPA EKKAANLPAV FVSSLLELMD  660
TFQGKACHIS PPSVLDPLGK TNPAVSGGDA SRAEEHSGEA HPSAHGNGTH GSAGRRKKPN  720
GGWSPLVAAF DRLSANMLNI EKGRDERSER LWALENRKYD LEKNKYELQA RKVDAEREDR  780
KGLVRVLGNL AGAFHRMADK M*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-07Trihelix family protein